Biology:Armatimonadetes
| Armatimonadetes | |
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| Phylum: | Armatimonadetes Tamaki et al. 2011
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Armatimonadetes is a phylum of gram-negative bacteria.
History
Armatimonadetes was originally described solely on the basis of environmental 16S rRNA gene clone sequences, and was temporarily titled candidate phylum OP10. However, in 2011 a bacterial strain belonging to the phylum was isolated from an aquatic plant in Japan. The species was named Armatimonas rosea and was the first member of its phylum, genus, and species.[1]
Members
Armatimonas rosea, an aerobic chemoheterotrophic bacterium, strain YO-36T, was isolated from rhizoplane of an aquatic plant (a reed, Phragmites australis) inhabiting a freshwater lake in Japan.[1]
Chthonomonas calidirosea, an aerobic, saccharolytic, obligately thermophilic, motile, non-spore-forming bacterium, strain T49(T), was isolated from geothermally heated soil at Hell's Gate, Tikitere, New Zealand.[2]
Phylogeny
| 16S rRNA-based LTP release 123 by The All-Species Living Tree Project.[3] | Annotree[4] and GTDB release 05-RS95 (17 July 2020).[5] | ||||||||||||||||||||||||||||||||||||||||||
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Taxonomy
The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[6] and National Center for Biotechnology Information (NCBI).[7]
- Class Chthonomonadetes Lee et al. 2011
- Order Chthonomonadales Lee et al. 2011
- Family Chthonomonadaceae Lee et al. 2011
- Genus Chthonomonas Lee et al. 2011
- Species Chthonomonas calidirosea Lee et al. 2011
- Genus Chthonomonas Lee et al. 2011
- Family Chthonomonadaceae Lee et al. 2011
- Order Chthonomonadales Lee et al. 2011
- Class Fimbriimonadia Im et al. 2012
- Order Fimbriimonadales Im et al. 2012
- Family Fimbriimonadaceae Im et al. 2012
- Genus Fimbriimonas Im et al. 2012
- Species Fimbriimonas ginsengisoli Im et al. 2012
- Genus Fimbriimonas Im et al. 2012
- Family Fimbriimonadaceae Im et al. 2012
- Order Fimbriimonadales Im et al. 2012
- Class Armatimonadia Tamaki et al. 2011
- Order Armatimonadales Tamaki et al. 2011
- Family Armatimonadaceae Tamaki et al. 2011
- Genus Armatimonas Tamaki et al. 2011
- Species Armatimonas rosea Tamaki et al. 2011
- Genus Armatimonas Tamaki et al. 2011
- Family Armatimonadaceae Tamaki et al. 2011
- Order Capsulimonadales Li, Kudo & Tonouchi 2018
- Family Capsulimonadaceae Li, Kudo & Tonouchi 2018
- Genus Capsulimonas Li, Kudo & Tonouchi 2018
- Species Capsulimonas corticalis Li, Kudo & Tonouchi 2018
- Genus Capsulimonas Li, Kudo & Tonouchi 2018
- Family Capsulimonadaceae Li, Kudo & Tonouchi 2018
- Order Armatimonadales Tamaki et al. 2011
Notes
References
- ↑ 1.0 1.1 Tamaki, Hideyuki; Tanaka, Yasuhiro; Matsuzawa, Hiroaki; Muramatsu, Mizuho; Meng, Xian-Ying; Hanada, Satoshi; Mori, Kazuhiro; Kamagata, Yoichi (2010). "Armatimonas rosea gen. nov., sp. nov., a Gram-negative, aerobic, chemoheterotrophic bacterium of a novel bacterial phylum, Armatimonadetes phyl. nov., formally called the candidate phylum OP10". International Journal of Systematic and Evolutionary Microbiology 61 (Pt 6): 1442–7. doi:10.1099/ijs.0.025643-0. PMID 20622056.
- ↑ Lee, Kevin C. Y.; Dunfield, Peter F.; Morgan, Xochitl C.; Crowe, Michelle A.; Houghton, Karen M.; Vyssotski, Mikhail; Ryan, Jason L. J.; Lagutin, Kirill et al. (2010). "Chthonomonas calidirosea gen. nov., sp. nov., an aerobic, pigmented, thermophilic microorganism of a novel bacterial class, Chthonomonadetes classis. nov., of the newly described phylum Armatimonadetes originally designated candidate division OP10". International Journal of Systematic and Evolutionary Microbiology 61 (Pt 10): 2482–90. doi:10.1099/ijs.0.027235-0. PMID 21097641.
- ↑ All-Species Living Tree Project."16S rRNA-based LTP release 123 (full tree)". Silva Comprehensive Ribosomal RNA Database. http://www.arb-silva.de/fileadmin/silva_databases/living_tree/LTP_release_123/LTPs123_SSU_tree.pdf.
- ↑ Mendler, K; Chen, H; Parks, DH; Hug, LA; Doxey, AC (2019). "AnnoTree: visualization and exploration of a functionally annotated microbial tree of life". Nucleic Acids Research 47: 4442–4448. doi:10.1093/nar/gkz246. http://annotree.uwaterloo.ca/app/.
- ↑ cite website |title=GTDB release 05-RS95 |url=https://gtdb.ecogenomic.org/about#4%7C |website=Genome Taxonomy Database
- ↑ J.P. Euzéby. "Armatimonadetes". List of Prokaryotic names with Standing in Nomenclature (LPSN). http://www.bacterio.cict.fr/classifphyla.html#Armatimonadetes.
- ↑ Sayers. "Armatimonadetes". National Center for Biotechnology Information (NCBI) taxonomy database. https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Undef&id=67819&lvl=6&p.
External links
Wikidata ☰ Q4792907 entry
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