Biology:ModBase

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ModBase
Database.png
Content
DescriptionDatabase of comparative protein structure models
Contact
Research centreUniversity of California at San Francisco
LaboratoryDepartment of Bioengineering and Therapeutic Sciences
Author(s)Ursula Pieper, Eswar Narayanan, Ben Webb, Andrej Sali
Primary citationPieper & al. (2011)[1]
Release date1998
Access
Websitehttp://salilab.org/modbase
Download URLftp://salilab.org/databases/modbase
Web service URLhttp://salilab.org/modweb

ModBase is a database of annotated comparative protein structure models, containing models for more than 3.8 million unique protein sequences.[1] Models are created by the comparative modeling pipeline ModPipe which relies on the MODELLER program.

ModBase is developed in the laboratory of Andrej Sali at UCSF. ModBase models are also accessible through the Protein Model Portal.

See also

References

  1. 1.0 1.1 Pieper, Ursula; Webb Benjamin M; Barkan David T; Schneidman-Duhovny Dina; Schlessinger Avner; Braberg Hannes; Yang Zheng; Meng Elaine C et al. (Jan 2011). "ModBase, a database of annotated comparative protein structure models, and associated resources". Nucleic Acids Res. (England) 39 (Database issue): D465-74. doi:10.1093/nar/gkq1091. PMID 21097780. 

External links